BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H10LP1|AL426120
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1382 834 0.0
3x_Contig598 113 4e-25
>3x_Contig1382
Length = 8314
Score = 834 bits (419), Expect = 0.0
Identities = 432/437 (98%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 369 ctcagtgt-tgactacaagccttctacwcataagcatttatcgatagacgattttgattt 427
|||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 23 ctcagtgtgtgactataagccttctactcataagcatttatcgatagacgattttgattt 82
Query: 428 gttgaaagtcatcggtaaaggttctttcgggaaagtgatgcaggttagaaagcgtgatac 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gttgaaagtcatcggtaaaggttctttcgggaaagtgatgcaggttagaaagcgtgatac 142
Query: 488 aaacaaaatctatgcattgaaagctattaggaagtcttacattgtctccmaatccgaagt 547
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 143 aaacaaaatctatgcattgaaagctattaggaagtcttacattgtctccaaatccgaagt 202
Query: 548 tactcacactttagcagaacgtactgtcttagctcgtgttgataacccatttattgtacc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tactcacactttagcagaacgtactgtcttagctcgtgttgataacccatttattgtacc 262
Query: 608 attgavattctctttccaatcctcggaaaagctttacttggtcttggcgttcatcaacgg 667
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attgaaattctctttccaatcctcggaaaagctttacttggtcttggcgttcatcaacgg 322
Query: 668 tggtgaattgttctatcatttgcaaagagaggggagattcgatctatcacgttccagatt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tggtgaattgttctatcatttgcaaagagaggggagattcgatctatcacgttccagatt 382
Query: 728 ttacactgcagaattattatgcgcattggaagctctacacgatttcgatatcatttaccg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttacactgcagaattattatgcgcattggaagctctacacgatttcgatatcatttaccg 442
Query: 788 tgatttgaaaccagaga 804
|||||||||||||||||
Sbjct: 443 tgatttgaaaccagaga 459
>3x_Contig598
Length = 2989
Score = 113 bits (57), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 1 attctttactctatttcacaawtgagtttgacaacaccattgccaccattgaaccagaa 59
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 59 attctttactctatttcacaattgagtttgacaacaccattgccaccattgaaccagaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6058
Number of Sequences: 1807
Number of extensions: 6058
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)